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Jose Diaz-Gonzalez 8bc87ee656 feat: always overwrite the dokku.conf file for nginx 
This is necessary as sometimes older config is shipped with Dokku, meaning that security directives - amongst others - are not properly updated.

Refs #3342
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00_dokku-standard
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20_events
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apps
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build-env
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certs
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checks
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common
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config
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docker-options
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domains
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enter
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git
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logs
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network
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nginx-vhosts
feat: always overwrite the dokku.conf file for nginx
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plugin
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proxy
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ps
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repo
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scheduler-docker-local
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shell
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ssh-keys
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storage
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tags
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tar
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