diff --git a/plugins/00_dokku-standard/backup-check b/plugins/00_dokku-standard/backup-check
index b80e108f1..aae373832 100755
--- a/plugins/00_dokku-standard/backup-check
+++ b/plugins/00_dokku-standard/backup-check
@@ -16,4 +16,3 @@ for app in $APPS; do
 done
 
 exit $ret
-
diff --git a/plugins/00_dokku-standard/backup-import b/plugins/00_dokku-standard/backup-import
index 23af3913b..eca5228b3 100755
--- a/plugins/00_dokku-standard/backup-import
+++ b/plugins/00_dokku-standard/backup-import
@@ -7,10 +7,10 @@ TARGET_DIR="$3"
 
 [[ -f $IMPORT_DIR/.sshcommand ]] && mv $IMPORT_DIR/.sshcommand $TARGET_DIR/.sshcommand
 if [[ -f $IMPORT_DIR/.ssh/authorized_keys ]]; then
-    mkdir -p $TARGET_DIR/.ssh
-    cat $IMPORT_DIR/.ssh/authorized_keys $TARGET_DIR/.ssh/authorized_keys | uniq > $TARGET_DIR/.ssh/authorized_keys
-    chmod 0700 $TARGET_DIR/.ssh
-    chmod 0600 $TARGET_DIR/.ssh/*
+  mkdir -p $TARGET_DIR/.ssh
+  cat $IMPORT_DIR/.ssh/authorized_keys $TARGET_DIR/.ssh/authorized_keys | uniq > $TARGET_DIR/.ssh/authorized_keys
+  chmod 0700 $TARGET_DIR/.ssh
+  chmod 0600 $TARGET_DIR/.ssh/*
 fi
 [[ -f $IMPORT_DIR/HOSTNAME ]] && mv $IMPORT_DIR/HOSTNAME $TARGET_DIR/HOSTNAME
 [[ -f $IMPORT_DIR/VHOST ]] && mv $IMPORT_DIR/VHOST $TARGET_DIR/VHOST
diff --git a/plugins/00_dokku-standard/commands b/plugins/00_dokku-standard/commands
index 325beb1dc..8e4c36cb9 100755
--- a/plugins/00_dokku-standard/commands
+++ b/plugins/00_dokku-standard/commands
@@ -31,13 +31,13 @@ case "$1" in
 
   run)
     if [[ -z $2 ]]; then
-        echo "Please specify an app to run the command on"
-        exit 1
+      echo "Please specify an app to run the command on"
+      exit 1
     fi
     APP="$2"; IMAGE="dokku/$APP"
     if [[ ! -d "$DOKKU_ROOT/$APP" ]]; then
-        echo "App $APP does not exist"
-        exit 1
+      echo "App $APP does not exist"
+      exit 1
     fi
     shift 2
 
@@ -48,8 +48,8 @@ case "$1" in
   url)
     APP="$2";
     if [[ ! -d "$DOKKU_ROOT/$APP" ]]; then
-        echo "App $APP does not exist"
-        exit 1
+      echo "App $APP does not exist"
+      exit 1
     fi
 
     if [[ -f "$DOKKU_ROOT/$APP/URL" ]]; then
@@ -74,4 +74,3 @@ EOF
     ;;
 
 esac
-
diff --git a/plugins/00_dokku-standard/install b/plugins/00_dokku-standard/install
index bc804f546..9625e8fdc 100755
--- a/plugins/00_dokku-standard/install
+++ b/plugins/00_dokku-standard/install
@@ -2,7 +2,7 @@
 set -eo pipefail; [[ $DOKKU_TRACE ]] && set -x
 
 if [[ ! -f  "$DOKKU_ROOT/HOSTNAME" ]]; then
-    echo $(hostname -f) > $DOKKU_ROOT/HOSTNAME
+  echo $(hostname -f) > $DOKKU_ROOT/HOSTNAME
 fi
 
 # temporary hack for https://github.com/progrium/dokku/issues/82
diff --git a/plugins/apps/commands b/plugins/apps/commands
index c98546ab5..770f772f4 100755
--- a/plugins/apps/commands
+++ b/plugins/apps/commands
@@ -68,4 +68,3 @@ EOF
     ;;
 
 esac
-
diff --git a/plugins/backup/commands b/plugins/backup/commands
index 0571ed867..4c41037fc 100755
--- a/plugins/backup/commands
+++ b/plugins/backup/commands
@@ -2,7 +2,8 @@
 set -eo pipefail; [[ $DOKKU_TRACE ]] && set -x
 
 CURRENT_BACKUP_VERSION=1
-set -e; case "$1" in
+
+case "$1" in
   backup:export)
     OUTPUT_FILE="$2"
     BACKUP_DIR="$DOKKU_ROOT"
@@ -25,9 +26,9 @@ set -e; case "$1" in
 
     # if no file specified, output to stdout
     if [[ -z $OUTPUT_FILE ]]; then
-        cat $BACKUP_TMP_FILE
+      cat $BACKUP_TMP_FILE
     else
-        mv $BACKUP_TMP_FILE $OUTPUT_FILE
+      mv $BACKUP_TMP_FILE $OUTPUT_FILE
     fi
 
     rm -rf $BACKUP_TMP_DIR
@@ -49,14 +50,14 @@ set -e; case "$1" in
     tar xf $INPUT_FILE --directory=$BACKUP_TMP_DIR
 
     if [[ ! -f $BACKUP_TMP_DIR/.dokku_backup_version ]]; then
-        echo "Unable to determine backup version"
-        exit 1
+      echo "Unable to determine backup version"
+      exit 1
     fi
 
     VERSION=$(< $BACKUP_TMP_DIR/.dokku_backup_version)
     if [[ $VERSION -ne 1 ]]; then
-        echo "Unknown format version $VERSION"
-        exit 1
+      echo "Unknown format version $VERSION"
+      exit 1
     fi
 
     echo "Importing a version $VERSION backup..."
@@ -92,4 +93,3 @@ EOF
     ;;
 
 esac
-
diff --git a/plugins/checks/check-deploy b/plugins/checks/check-deploy
index e69182990..00346af5b 100755
--- a/plugins/checks/check-deploy
+++ b/plugins/checks/check-deploy
@@ -28,23 +28,23 @@ WAIT="${DOKKU_CHECKS_WAIT:-5}"
 # after successfully copying the file. Thus, we suppress stderr.
 # ref: https://github.com/dotcloud/docker/issues/3986
 if [[ ! -f "$FILENAME" ]] ; then
-    echo "       check-deploy: $FILENAME not found. attempting to retrieve it from container ..."
-    TMPDIR=$(mktemp -d /tmp/CHECKS.XXXXX)
-    docker cp $CONTAINERID:/app/CHECKS $TMPDIR 2> /dev/null || true
-    if [[ ! -s "${TMPDIR}/CHECKS" ]] ; then
-        echo "       CHECKS file not found in container. skipping checks."
-        rm -rf $TMPDIR
-        exit 0
-    else
-        echo "       CHECKS file found in container"
-        FILENAME=${TMPDIR}/CHECKS
+  echo "       check-deploy: $FILENAME not found. attempting to retrieve it from container ..."
+  TMPDIR=$(mktemp -d /tmp/CHECKS.XXXXX)
+  docker cp $CONTAINERID:/app/CHECKS $TMPDIR 2> /dev/null || true
+  if [[ ! -s "${TMPDIR}/CHECKS" ]] ; then
+    echo "       CHECKS file not found in container. skipping checks."
+    rm -rf $TMPDIR
+    exit 0
+  else
+    echo "       CHECKS file found in container"
+    FILENAME=${TMPDIR}/CHECKS
 
-        function cleanup() {
-          echo "       removing CHECKS file copied from container"
-          rm -rf $TMPDIR
-        }
-        trap cleanup EXIT
-    fi
+    function cleanup() {
+      echo "       removing CHECKS file copied from container"
+      rm -rf $TMPDIR
+    }
+    trap cleanup EXIT
+  fi
 fi
 
 echo "Waiting $WAIT seconds ..."
diff --git a/plugins/config/backup-import b/plugins/config/backup-import
index 22c1d9324..7652df515 100755
--- a/plugins/config/backup-import
+++ b/plugins/config/backup-import
@@ -8,5 +8,5 @@ TARGET_DIR="$3"
 
 cd $IMPORT_DIR
 for file in */ENV; do
-    cp $file "$TARGET_DIR/$file"
+  cp $file "$TARGET_DIR/$file"
 done
diff --git a/plugins/config/commands b/plugins/config/commands
index 441e5fec5..724fb58c9 100755
--- a/plugins/config/commands
+++ b/plugins/config/commands
@@ -75,7 +75,6 @@ config_write() {
 }
 
 case "$1" in
-
   config)
     APP="$2"
 
@@ -186,4 +185,3 @@ EOF
   ;;
 
 esac
-
diff --git a/plugins/git/backup-import b/plugins/git/backup-import
index 81c169a9d..8d40fd316 100755
--- a/plugins/git/backup-import
+++ b/plugins/git/backup-import
@@ -6,15 +6,15 @@ IMPORT_DIR="$2"
 TARGET_DIR="$3"
 APPS="$4"
 
-while read APP; do 
-    APP_PATH="$TARGET_DIR/$APP"; 
-    git init --bare $APP_PATH > /dev/null
-    PRERECEIVE_HOOK="$APP_PATH/hooks/pre-receive"
-    cat > $PRERECEIVE_HOOK <<EOF
+while read APP; do
+  APP_PATH="$TARGET_DIR/$APP";
+  git init --bare $APP_PATH > /dev/null
+  PRERECEIVE_HOOK="$APP_PATH/hooks/pre-receive"
+  cat > $PRERECEIVE_HOOK <<EOF
 #!/usr/bin/env bash
 set -e; set -o pipefail;
 
 cat | DOKKU_ROOT="$DOKKU_ROOT" dokku git-hook $APP
 EOF
-    chmod +x $PRERECEIVE_HOOK
+  chmod +x $PRERECEIVE_HOOK
 done < $APPS > /dev/null
diff --git a/plugins/git/commands b/plugins/git/commands
index 224fcbede..0b90005e5 100755
--- a/plugins/git/commands
+++ b/plugins/git/commands
@@ -2,19 +2,19 @@
 set -eo pipefail; [[ $DOKKU_TRACE ]] && set -x
 
 git_archive_all() {
-    APP=$1; REV=$2
-    TMP_WORK_DIR=$(mktemp -d)
-    chmod 755 $TMP_WORK_DIR
-    unset GIT_DIR GIT_WORK_TREE
-    git clone $DOKKU_ROOT/$APP $TMP_WORK_DIR &> /dev/null
-    pushd $TMP_WORK_DIR > /dev/null
-    git config advice.detachedHead false
-    git checkout $REV &> /dev/null
-    git submodule update --init --recursive &> /dev/null
-    find -name .git -prune -exec rm -rf {} \; > /dev/null
-    tar c .
-    popd > /dev/null
-    rm -rf $TMP_WORK_DIR > /dev/null
+  APP=$1; REV=$2
+  TMP_WORK_DIR=$(mktemp -d)
+  chmod 755 $TMP_WORK_DIR
+  unset GIT_DIR GIT_WORK_TREE
+  git clone $DOKKU_ROOT/$APP $TMP_WORK_DIR &> /dev/null
+  pushd $TMP_WORK_DIR > /dev/null
+  git config advice.detachedHead false
+  git checkout $REV &> /dev/null
+  git submodule update --init --recursive &> /dev/null
+  find -name .git -prune -exec rm -rf {} \; > /dev/null
+  tar c .
+  popd > /dev/null
+  rm -rf $TMP_WORK_DIR > /dev/null
 }
 
 case "$1" in
@@ -31,7 +31,6 @@ case "$1" in
         echo $'\e[1G\e[K'"-----> WARNING: deploy did not complete, you must push to master."
         echo $'\e[1G\e[K'"-----> for example, try 'git push <dokku> ${refname/refs\/heads\/}:master'"
       fi
-
     done
     ;;
 
@@ -40,15 +39,15 @@ case "$1" in
     APP_PATH=$DOKKU_ROOT/$APP
 
     if [[ $1 == "git-receive-pack" && ! -d "$APP_PATH/refs" ]]; then
-        git init --bare $APP_PATH > /dev/null
-        PRERECEIVE_HOOK="$APP_PATH/hooks/pre-receive"
-        cat > $PRERECEIVE_HOOK <<EOF
+      git init --bare $APP_PATH > /dev/null
+      PRERECEIVE_HOOK="$APP_PATH/hooks/pre-receive"
+      cat > $PRERECEIVE_HOOK <<EOF
 #!/usr/bin/env bash
 set -e; set -o pipefail;
 
 cat | DOKKU_ROOT="$DOKKU_ROOT" dokku git-hook $APP
 EOF
-        chmod +x $PRERECEIVE_HOOK
+      chmod +x $PRERECEIVE_HOOK
     fi
 
     args=$@
@@ -58,5 +57,5 @@ EOF
   help)
     cat
     ;;
-esac
 
+esac
diff --git a/plugins/nginx-vhosts/backup-import b/plugins/nginx-vhosts/backup-import
index 7ad087e3b..232b2a4eb 100755
--- a/plugins/nginx-vhosts/backup-import
+++ b/plugins/nginx-vhosts/backup-import
@@ -9,6 +9,6 @@ TARGET_DIR="$3"
 cd $IMPORT_DIR
 
 for file in */tls/server.*; do
-    mkdir -p $(dirname $TARGET_DIR$file)
-    cp $file $TARGET_DIR$file
+  mkdir -p $(dirname $TARGET_DIR$file)
+  cp $file $TARGET_DIR$file
 done